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  5. LOC_Os12g43490.1

LOC_Os12g43490.1


Description : osmotin 34


Gene families : OG_01_0006859 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006859_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g43490.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g43490.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_107


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 31 242
IPR017949 Thaumatin_CS ProSitePatterns 86 101
IPR001938 Thaumatin Pfam 37 241
IPR001938 Thaumatin PRINTS 51 60
IPR001938 Thaumatin PRINTS 231 240
IPR001938 Thaumatin PRINTS 73 84
IPR001938 Thaumatin PRINTS 32 44
IPR001938 Thaumatin PRINTS 86 115
IPR001938 Thaumatin PANTHER 11 241
IPR001938 Thaumatin SMART 33 241
IPR001938 Thaumatin PIRSF 2 258
IPR037176 Osmotin/thaumatin-like_sf Gene3D 30 242
IPR001938 Thaumatin ProSiteProfiles 30 241
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 259 2.4e-65 37 241
No external refs found!