LOC_Os12g44250.1

Description : vesicle-associated membrane protein 726

Gene families : OG_01_0000329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000329_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g44250.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g44250.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_222
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_18

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042855	V_SNARE_CC	Pfam	129	215
IPR011012	Longin-like_dom_sf	SUPERFAMILY	6	121
IPR010908	Longin_dom	ProSiteProfiles	10	114
IPR010908	Longin_dom	CDD	7	121
IPR042855	V_SNARE_CC	ProSiteProfiles	130	190
IPR010908	Longin_dom	SMART	31	113
IPR010908	Longin_dom	Pfam	32	105
IPR001388	Synaptobrevin-like	PRINTS	191	210
IPR001388	Synaptobrevin-like	PRINTS	155	174
IPR001388	Synaptobrevin-like	PRINTS	135	154

No CAZYmes available for this sequence

External Links

No external refs found!