1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.5G128400.1

Sevir.5G128400.1


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0017112 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017112_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G128400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G128400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_5


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 449 496
IPR011011 Znf_FYVE_PHD SUPERFAMILY 439 515
IPR034732 EPHD ProSiteProfiles 505 616
IPR019787 Znf_PHD-finger Pfam 449 498
IPR019787 Znf_PHD-finger ProSiteProfiles 446 499
IPR013083 Znf_RING/FYVE/PHD Gene3D 432 502
IPR013083 Znf_RING/FYVE/PHD Gene3D 503 618
IPR001965 Znf_PHD SMART 448 497
IPR001965 Znf_PHD SMART 562 616

No CAZYmes available for this sequence

No external refs found!