Sevir.1G166400.1

Description : winged-helix DNA-binding transcription factor family protein

Gene families : OG_01_0012590 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012590_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G166400.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G166400.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_177
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_19

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000232	HSF_DNA-bd	PRINTS	66	78
IPR000232	HSF_DNA-bd	PRINTS	27	50
IPR000232	HSF_DNA-bd	PRINTS	79	91
IPR027725	HSF_fam	PANTHER	19	474
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	23	117
IPR036388	WH-like_DNA-bd_sf	Gene3D	22	118
IPR000232	HSF_DNA-bd	ProSitePatterns	67	91
IPR000232	HSF_DNA-bd	SMART	23	117
IPR000232	HSF_DNA-bd	Pfam	27	117

No CAZYmes available for this sequence

External Links

No external refs found!