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  5. Sevir.5G135500.1

Sevir.5G135500.1


Description : regulatory protein (NPR1)


Gene families : OG_01_0013445 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013445_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G135500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G135500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ISM GOs from InterProScan
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway ISM GOs from InterProScan
BP GO:2000031 regulation of salicylic acid mediated signaling pathway ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR021094 NPR1/NIM1-like_C Pfam 377 564
IPR000210 BTB/POZ_dom Pfam 53 144
IPR002110 Ankyrin_rpt Pfam 305 346
IPR024228 NPR_central_dom Pfam 234 278
IPR011333 SKP1/BTB/POZ_sf Gene3D 29 231
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 271 377
IPR002110 Ankyrin_rpt ProSiteProfiles 335 360
IPR036770 Ankyrin_rpt-contain_sf Gene3D 242 390
IPR000210 BTB/POZ_dom ProSiteProfiles 55 146
IPR000210 BTB/POZ_dom SMART 55 197
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 51 193
IPR044292 NPR PANTHER 15 574
IPR002110 Ankyrin_rpt SMART 335 364
IPR002110 Ankyrin_rpt SMART 272 300
IPR002110 Ankyrin_rpt SMART 301 331

No CAZYmes available for this sequence

No external refs found!