Sevir.5G139800.1

Description : mitotic phosphoprotein N\' end (MPPN) family protein

Gene families : OG_01_0008918 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008918_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G139800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G139800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_74

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	ISM	GOs from InterProScan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031965	nuclear membrane	ISM	GOs from InterProScan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017389	Nucleoporin_NUP53	PANTHER	1	323
IPR035979	RBD_domain_sf	SUPERFAMILY	170	243
IPR007846	RRM_NUP35_dom	Pfam	168	251
IPR017389	Nucleoporin_NUP53	PIRSF	1	323
IPR007846	RRM_NUP35_dom	ProSiteProfiles	167	248
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	168	241

No CAZYmes available for this sequence

External Links

No external refs found!