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  5. Sevir.5G143200.1

Sevir.5G143200.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001864 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001864_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G143200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G143200.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 302 346
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 23 390
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 254 390
IPR001680 WD40_rpt SMART 295 337
IPR001680 WD40_rpt SMART 18 59
IPR001680 WD40_rpt SMART 148 189
IPR001680 WD40_rpt SMART 62 101
IPR001680 WD40_rpt SMART 349 388
IPR001680 WD40_rpt SMART 107 145
IPR001680 WD40_rpt Pfam 301 337
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3 221

No CAZYmes available for this sequence

No external refs found!