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  5. Sevir.5G144500.1

Sevir.5G144500.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005477 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005477_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G144500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G144500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_133


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020472 G-protein_beta_WD-40_rep PRINTS 139 153
IPR020472 G-protein_beta_WD-40_rep PRINTS 191 205
IPR020472 G-protein_beta_WD-40_rep PRINTS 283 297
IPR045227 WDR18/Ipi3/RID3 PANTHER 6 376
IPR001680 WD40_rpt ProSiteProfiles 264 305
IPR001680 WD40_rpt ProSiteProfiles 122 153
IPR001680 WD40_rpt SMART 115 152
IPR001680 WD40_rpt SMART 75 112
IPR001680 WD40_rpt SMART 166 204
IPR001680 WD40_rpt SMART 207 245
IPR001680 WD40_rpt SMART 257 296
IPR001680 WD40_rpt ProSiteProfiles 87 121
IPR019775 WD40_repeat_CS ProSitePatterns 139 153
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 163 328
IPR001680 WD40_rpt Pfam 116 152
IPR001680 WD40_rpt Pfam 170 204
IPR001680 WD40_rpt Pfam 261 296
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 2 162
IPR019775 WD40_repeat_CS ProSitePatterns 283 297
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 11 316

No CAZYmes available for this sequence

No external refs found!