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  5. Sevir.5G160400.1

Sevir.5G160400.1


Description : importin alpha isoform 4


Gene families : OG_01_0005987 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005987_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G160400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G160400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_181
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_19


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006606 protein import into nucleus ISM GOs from InterProScan
MF GO:0061608 nuclear import signal receptor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 79 491
IPR002652 Importin-a_IBB ProSiteProfiles 1 59
IPR032413 Arm_3 Pfam 452 495
IPR016024 ARM-type_fold SUPERFAMILY 17 494
IPR000225 Armadillo SMART 150 184
IPR000225 Armadillo SMART 107 148
IPR000225 Armadillo SMART 312 353
IPR000225 Armadillo SMART 185 227
IPR000225 Armadillo SMART 398 438
IPR000225 Armadillo SMART 355 395
IPR000225 Armadillo SMART 270 310
IPR000225 Armadillo SMART 229 268
IPR024931 Importin_alpha PIRSF 2 518
IPR000225 Armadillo Pfam 159 183
IPR000225 Armadillo Pfam 240 267
IPR000225 Armadillo Pfam 355 394
IPR000225 Armadillo Pfam 271 309
IPR002652 Importin-a_IBB Pfam 12 97

No CAZYmes available for this sequence

No external refs found!