Sevir.5G177510.1

Description : Met-10+ like family protein

Gene families : OG_01_0009490 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009490_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G177510.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G177510.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_129

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009019	obsolete tRNA (guanine-N1-)-methyltransferase activity	ISM	GOs from InterProScan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0030488	tRNA methylation	ISM	GOs from InterProScan
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR025792	tRNA_Gua_MeTrfase_euk	Hamap	61	561
IPR030382	MeTrfase_TRM5/TYW2	Pfam	297	497
IPR030382	MeTrfase_TRM5/TYW2	ProSiteProfiles	298	561
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	294	559

No CAZYmes available for this sequence

External Links

No external refs found!