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  5. Sevir.5G185800.1

Sevir.5G185800.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0005533 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005533_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G185800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G185800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_151
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_4


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0015995 chlorophyll biosynthetic process ISM GOs from InterProScan
BP GO:0033014 tetrapyrrole biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 205 316
IPR019734 TPR_repeat SMART 287 320
IPR019734 TPR_repeat SMART 207 240
IPR019734 TPR_repeat SMART 247 280
IPR044243 FLU PANTHER 1 320
IPR011990 TPR-like_helical_dom_sf Gene3D 202 320

No CAZYmes available for this sequence

No external refs found!