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  5. Sevir.5G192000.1

Sevir.5G192000.1


Description : Ubiquitin fusion degradation UFD1 family protein


Gene families : OG_01_0015616 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015616_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G192000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G192000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_61


Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 476 524
IPR004854 Ufd1-like PANTHER 1 567
IPR004854 Ufd1-like Pfam 90 256
IPR042299 Ufd1-like_Nn Gene3D 70 181
IPR013087 Znf_C2H2_type ProSitePatterns 545 565

No CAZYmes available for this sequence

No external refs found!