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  5. Sevir.5G195500.1

Sevir.5G195500.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0008851 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008851_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G195500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G195500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 144 307
IPR002885 Pentatricopeptide_rpt Pfam 188 237
IPR002885 Pentatricopeptide_rpt Pfam 160 185
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 154 188
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 189 223
IPR002885 Pentatricopeptide_rpt TIGRFAM 160 188
IPR002885 Pentatricopeptide_rpt TIGRFAM 191 225
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 224 258

No CAZYmes available for this sequence

No external refs found!