Sevir.5G197600.1

Description : peptide deformylase 1A

Gene families : OG_01_0006336 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006336_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G197600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G197600.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_144

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
MF	GO:0042586	peptide deformylase activity	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023635	Peptide_deformylase	CDD	73	229
IPR023635	Peptide_deformylase	Pfam	73	236
IPR036821	Peptide_deformylase_sf	SUPERFAMILY	71	241
IPR023635	Peptide_deformylase	Hamap	68	244
IPR036821	Peptide_deformylase_sf	Gene3D	72	251
IPR023635	Peptide_deformylase	PRINTS	102	131
IPR023635	Peptide_deformylase	PRINTS	175	186
IPR023635	Peptide_deformylase	PRINTS	187	205
IPR023635	Peptide_deformylase	PRINTS	206	235
IPR023635	Peptide_deformylase	PANTHER	37	258
IPR023635	Peptide_deformylase	TIGRFAM	74	235

No CAZYmes available for this sequence

External Links

No external refs found!