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  5. Sevir.5G207100.1

Sevir.5G207100.1


Description : Vesicle transport v-SNARE family protein


Gene families : OG_01_0003335 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003335_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G207100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G207100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_76


Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity ISM GOs from InterProScan
CC GO:0005794 Golgi apparatus ISM GOs from InterProScan
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N Pfam 12 90
IPR027027 GOSR2/Membrin/Bos1 PIRSF 1 218
IPR038407 v-SNARE_N_sf Gene3D 1 99
IPR010989 SNARE SUPERFAMILY 6 92

No CAZYmes available for this sequence

No external refs found!