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  5. Sevir.1G174700.1

Sevir.1G174700.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002214 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002214_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G174700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G174700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_50


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 109 381
IPR012952 BING4_C_dom Pfam 347 425
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 110 374
IPR019775 WD40_repeat_CS ProSitePatterns 287 301
IPR001680 WD40_rpt Pfam 267 300
IPR001680 WD40_rpt SMART 139 176
IPR001680 WD40_rpt SMART 261 300
IPR001680 WD40_rpt ProSiteProfiles 268 309
IPR040315 WDR46/Utp7 PANTHER 7 522
IPR012952 BING4_C_dom SMART 346 426

No CAZYmes available for this sequence

No external refs found!