1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.5G221500.1

Sevir.5G221500.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0015565 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015565_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G221500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G221500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_473


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0019722 calcium-mediated signaling ISM GOs from InterProScan
MF GO:0019900 kinase binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 107 142
IPR002048 EF_hand_dom ProSiteProfiles 151 186
IPR011992 EF-hand-dom_pair SUPERFAMILY 24 206
IPR002048 EF_hand_dom Pfam 75 97
IPR002048 EF_hand_dom Pfam 110 178
IPR002048 EF_hand_dom CDD 111 181
IPR045198 CNBL1-10 PANTHER 1 218
IPR002048 EF_hand_dom SMART 155 183
IPR002048 EF_hand_dom SMART 74 102
IPR002048 EF_hand_dom SMART 111 139
IPR002048 EF_hand_dom ProSiteProfiles 70 105

No CAZYmes available for this sequence

No external refs found!