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  5. Sevir.5G222700.1

Sevir.5G222700.1


Description : disease resistance family protein / LRR family protein


Gene families : OG_01_0000103 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000103_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G222700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G222700.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 476 902
IPR032675 LRR_dom_sf Gene3D 41 231
IPR001611 Leu-rich_rpt ProSiteProfiles 164 184
IPR001611 Leu-rich_rpt Pfam 237 250
IPR001611 Leu-rich_rpt Pfam 114 126
IPR001611 Leu-rich_rpt Pfam 827 846
IPR001611 Leu-rich_rpt Pfam 803 823
IPR032675 LRR_dom_sf Gene3D 232 332
IPR003591 Leu-rich_rpt_typical-subtyp SMART 800 823
IPR003591 Leu-rich_rpt_typical-subtyp SMART 237 261
IPR003591 Leu-rich_rpt_typical-subtyp SMART 824 848
IPR003591 Leu-rich_rpt_typical-subtyp SMART 162 190
IPR003591 Leu-rich_rpt_typical-subtyp SMART 408 432
IPR003591 Leu-rich_rpt_typical-subtyp SMART 113 136
IPR003591 Leu-rich_rpt_typical-subtyp SMART 212 235
IPR003591 Leu-rich_rpt_typical-subtyp SMART 286 309
IPR003591 Leu-rich_rpt_typical-subtyp SMART 716 740
IPR003591 Leu-rich_rpt_typical-subtyp SMART 456 477
IPR003591 Leu-rich_rpt_typical-subtyp SMART 360 384
IPR013210 LRR_N_plant-typ Pfam 44 80
IPR032675 LRR_dom_sf Gene3D 333 451

No CAZYmes available for this sequence

No external refs found!