Sevir.5G238600.1

Description : Uroporphyrinogen decarboxylase

Gene families : OG_01_0009594 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009594_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G238600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G238600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_213
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_111

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006361	Uroporphyrinogen_deCO2ase_HemE	CDD	53	386
IPR000257	Uroporphyrinogen_deCOase	Pfam	50	386
IPR000257	Uroporphyrinogen_deCOase	ProSitePatterns	184	200
IPR038071	UROD/MetE-like_sf	SUPERFAMILY	50	389
IPR000257	Uroporphyrinogen_deCOase	ProSitePatterns	65	74
IPR006361	Uroporphyrinogen_deCO2ase_HemE	Hamap	48	388
IPR038071	UROD/MetE-like_sf	Gene3D	41	389
IPR006361	Uroporphyrinogen_deCO2ase_HemE	TIGRFAM	51	385

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.5G238600.1

Expression Profile

Co-expression Networks

Functional Annotation