Sevir.5G278600.1

Description : formyltransferase, putative

Gene families : OG_01_0002013 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002013_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G278600.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G278600.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004479	methionyl-tRNA formyltransferase activity	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	ISM	GOs from InterProScan
BP	GO:0019988	charged-tRNA amino acid modification	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071951	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	ISM	GOs from InterProScan
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005793	Formyl_trans_C	Pfam	262	369
IPR011034	Formyl_transferase-like_C_sf	SUPERFAMILY	263	370
IPR036477	Formyl_transf_N_sf	SUPERFAMILY	33	264
IPR037022	Formyl_trans_C_sf	Gene3D	265	376
IPR044135	Met-tRNA-FMT_C	CDD	266	362
IPR005794	Fmt	Hamap	31	372
IPR041711	Met-tRNA-FMT_N	CDD	31	263
IPR002376	Formyl_transf_N	Pfam	32	216

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.5G278600.1

Expression Profile

Co-expression Networks

Functional Annotation