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  5. Sevir.5G279700.1

Sevir.5G279700.1


Description : zinc finger protein-related


Gene families : OG_01_0001346 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001346_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G279700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G279700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_33
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_6


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 1103 1151
IPR017921 Znf_CTCHY ProSiteProfiles 1044 1107
IPR008913 Znf_CHY ProSiteProfiles 972 1041
IPR037274 Znf_CHY_sf SUPERFAMILY 971 1035
IPR008913 Znf_CHY Pfam 979 1054
IPR001841 Znf_RING ProSiteProfiles 1108 1149
IPR037275 Znf_CTCHY_sf SUPERFAMILY 1045 1100
IPR012312 Hemerythrin-like Pfam 42 168
IPR012312 Hemerythrin-like Pfam 287 419
IPR012312 Hemerythrin-like Pfam 636 797
IPR039512 RCHY1_zinc-ribbon Pfam 1155 1212
IPR001841 Znf_RING SMART 1108 1149

No CAZYmes available for this sequence

No external refs found!