Sevir.5G289500.1

Description : Clathrin adaptor complexes medium subunit family protein

Gene families : OG_01_0011388 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011388_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G289500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G289500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_53
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001392	Clathrin_mu	PIRSF	4	429
IPR018240	Clathrin_mu_CS	ProSitePatterns	257	271
IPR028565	MHD	Pfam	160	427
IPR028565	MHD	ProSiteProfiles	171	427
IPR011012	Longin-like_dom_sf	SUPERFAMILY	5	142
IPR001392	Clathrin_mu	PRINTS	306	321
IPR001392	Clathrin_mu	PRINTS	104	131
IPR001392	Clathrin_mu	PRINTS	15	35
IPR001392	Clathrin_mu	PRINTS	162	190
IPR001392	Clathrin_mu	PRINTS	237	264
IPR001392	Clathrin_mu	PRINTS	346	357
IPR036168	AP2_Mu_C_sf	SUPERFAMILY	160	427
IPR022775	AP_mu_sigma_su	Pfam	5	132
IPR018240	Clathrin_mu_CS	ProSitePatterns	160	180

No CAZYmes available for this sequence

External Links

No external refs found!