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  5. Sevir.5G308300.1

Sevir.5G308300.1


Description : trehalose-phosphatase/synthase 7


Gene families : OG_01_0002237 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002237_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G308300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G308300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_7


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0005992 trehalose biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001830 Glyco_trans_20 PANTHER 1 869
IPR023214 HAD_sf Gene3D 607 839
IPR001830 Glyco_trans_20 Pfam 75 558
IPR003337 Trehalose_PPase Pfam 608 841
IPR036412 HAD-like_sf SUPERFAMILY 605 853
IPR001830 Glyco_trans_20 CDD 75 558
IPR006379 HAD-SF_hydro_IIB TIGRFAM 607 809
IPR003337 Trehalose_PPase TIGRFAM 603 853
HMM Family HMM Length Query Length e-Value Query Start Query End
GT20 475 879 6.3e-177 72 559
No external refs found!