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  5. Sevir.1G019000.1

Sevir.1G019000.1


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0001076 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001076_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G019000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G019000.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_59


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001650 Helicase_C Pfam 292 409
IPR014001 Helicase_ATP-bd ProSiteProfiles 89 262
IPR027417 P-loop_NTPase SUPERFAMILY 90 413
IPR014001 Helicase_ATP-bd SMART 77 267
IPR027417 P-loop_NTPase Gene3D 45 259
IPR001650 Helicase_C SMART 328 411
IPR027417 P-loop_NTPase Gene3D 278 452
IPR001650 Helicase_C ProSiteProfiles 291 453
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 82 246

No CAZYmes available for this sequence

No external refs found!