Sevir.5G324000.1

Description : elongation factor family protein

Gene families : OG_01_0000827 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000827_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G324000.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G324000.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_96

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006298	BipA	TIGRFAM	64	665
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	209	365
IPR000795	T_Tr_GTP-bd_dom	PRINTS	106	114
IPR000795	T_Tr_GTP-bd_dom	PRINTS	126	136
IPR000795	T_Tr_GTP-bd_dom	PRINTS	142	153
IPR000795	T_Tr_GTP-bd_dom	PRINTS	178	187
IPR000795	T_Tr_GTP-bd_dom	PRINTS	66	79
IPR042116	TypA/BipA_C	Gene3D	550	665
IPR027417	P-loop_NTPase	Gene3D	62	260
IPR031157	G_TR_CS	ProSitePatterns	99	114
IPR035647	EFG_III/V	SUPERFAMILY	369	453
IPR035647	EFG_III/V	SUPERFAMILY	464	580
IPR000795	T_Tr_GTP-bd_dom	Pfam	63	258
IPR000640	EFG_V-like	Pfam	463	546
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	62	260
IPR005225	Small_GTP-bd_dom	TIGRFAM	64	206
IPR027417	P-loop_NTPase	SUPERFAMILY	59	269

No CAZYmes available for this sequence

External Links

No external refs found!