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  5. Sevir.5G326800.1

Sevir.5G326800.1


Description : potassium channel in Arabidopsis thaliana 1


Gene families : OG_01_0005630 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005630_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G326800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_34


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISM GOs from InterProScan
MF GO:0005249 voltage-gated potassium channel activity ISM GOs from InterProScan
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
BP GO:0006813 potassium ion transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 306 499
IPR000595 cNMP-bd_dom SMART 379 496
IPR014710 RmlC-like_jellyroll Gene3D 343 504
IPR000595 cNMP-bd_dom Pfam 399 484
IPR000595 cNMP-bd_dom ProSiteProfiles 379 498
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 275 286
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 97 107
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 293 302
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 108 117
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 249 266
IPR005821 Ion_trans_dom Pfam 62 308
IPR045319 KAT/AKT PANTHER 1 505
IPR000595 cNMP-bd_dom CDD 379 491

No CAZYmes available for this sequence

No external refs found!