Sevir.5G333100.3

Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Gene families : OG_01_0014567 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014567_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G333100.3	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G333100.3
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_42

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	ISM	GOs from InterProScan
BP	GO:0006364	rRNA processing	ISM	GOs from InterProScan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005227	YqgF	Pfam	24	161
IPR005227	YqgF	TIGRFAM	26	161
IPR037027	YqgF/RNaseH-like_dom_sf	Gene3D	21	171
IPR005227	YqgF	CDD	25	162
IPR005227	YqgF	Hamap	23	164
IPR005227	YqgF	PANTHER	1	171
IPR012337	RNaseH-like_sf	SUPERFAMILY	24	164
IPR006641	YqgF/RNaseH-like_dom	SMART	23	128

No CAZYmes available for this sequence

External Links

No external refs found!