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  5. Sevir.5G347900.1

Sevir.5G347900.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003071 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003071_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G347900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G347900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_387


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 237 271
IPR011990 TPR-like_helical_dom_sf Gene3D 251 434
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 272 306
IPR002885 Pentatricopeptide_rpt Pfam 306 350
IPR002885 Pentatricopeptide_rpt Pfam 236 284
IPR002885 Pentatricopeptide_rpt Pfam 204 234
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 202 236
IPR011990 TPR-like_helical_dom_sf Gene3D 104 250
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 307 341
IPR002885 Pentatricopeptide_rpt TIGRFAM 275 308
IPR002885 Pentatricopeptide_rpt TIGRFAM 309 342
IPR002885 Pentatricopeptide_rpt TIGRFAM 239 273
IPR002885 Pentatricopeptide_rpt TIGRFAM 204 238

No CAZYmes available for this sequence

No external refs found!