Sevir.5G355032.1

Description : apurinic endonuclease-redox protein

Gene families : OG_01_0009025 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009025_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G355032.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G355032.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004518	nuclease activity	ISM	GOs from InterProScan
MF	GO:0004519	endonuclease activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036691	Endo/exonu/phosph_ase_sf	SUPERFAMILY	79	335
IPR005135	Endo/exonuclease/phosphatase	Pfam	82	326
IPR020848	AP_endonuclease_F1_CS	ProSitePatterns	271	286
IPR004808	AP_endonuc_1	TIGRFAM	79	334
IPR020848	AP_endonuclease_F1_CS	ProSitePatterns	294	305
IPR004808	AP_endonuc_1	ProSiteProfiles	79	335
IPR004808	AP_endonuc_1	PANTHER	26	335
IPR036691	Endo/exonu/phosph_ase_sf	Gene3D	47	334

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.5G355032.1

Expression Profile

Co-expression Networks

Functional Annotation