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  5. Sevir.1G019400.1

Sevir.1G019400.1


Description : sodium/calcium exchanger family protein / calcium-binding EF hand family protein


Gene families : OG_01_0000915 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000915_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G019400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G019400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_107


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom CDD 298 362
IPR004713 CaH_exchang PANTHER 9 570
IPR011992 EF-hand-dom_pair SUPERFAMILY 297 375
IPR004837 NaCa_Exmemb Pfam 420 563
IPR004837 NaCa_Exmemb Pfam 77 254
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 306 318
IPR002048 EF_hand_dom ProSiteProfiles 293 328

No CAZYmes available for this sequence

No external refs found!