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  5. Sevir.5G383100.1

Sevir.5G383100.1


Description : FTSH protease 10


Gene families : OG_01_0001841 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001841_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G383100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G383100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_145
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_29


Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity ISM GOs from InterProScan
MF GO:0004222 metalloendopeptidase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041569 AAA_lid_3 Pfam 528 567
IPR011546 Pept_M41_FtsH_extracell Pfam 146 255
IPR000642 Peptidase_M41 Pfam 582 763
IPR037219 Peptidase_M41-like Gene3D 584 774
IPR005936 FtsH TIGRFAM 267 765
IPR027417 P-loop_NTPase Gene3D 309 498
IPR003593 AAA+_ATPase SMART 361 501
IPR027417 P-loop_NTPase SUPERFAMILY 325 572
IPR003960 ATPase_AAA_CS ProSitePatterns 469 487
IPR005936 FtsH Hamap 15 780
IPR003959 ATPase_AAA_core Pfam 366 498
IPR037219 Peptidase_M41-like SUPERFAMILY 582 773

No CAZYmes available for this sequence

No external refs found!