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  5. Sevir.5G396500.1

Sevir.5G396500.1


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0014877 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014877_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G396500.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G396500.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_49


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017884 SANT_dom ProSiteProfiles 122 169
IPR017930 Myb_dom Pfam 121 165
IPR001005 SANT/Myb ProSiteProfiles 22 76
IPR001005 SANT/Myb CDD 29 67
IPR017930 Myb_dom ProSiteProfiles 114 170
IPR001005 SANT/Myb SMART 118 168
IPR001005 SANT/Myb SMART 26 78
IPR009057 Homeobox-like_sf SUPERFAMILY 28 75
IPR006447 Myb_dom_plants TIGRFAM 119 168
IPR001005 SANT/Myb ProSiteProfiles 114 166
IPR009057 Homeobox-like_sf SUPERFAMILY 115 168
IPR001005 SANT/Myb CDD 121 166

No CAZYmes available for this sequence

No external refs found!