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  5. Sevir.5G398532.1

Sevir.5G398532.1


Description : SNARE-like superfamily protein


Gene families : OG_01_0001455 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001455_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G398532.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G398532.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_545


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045848 R-SNARE_YKT6 CDD 148 208
IPR042855 V_SNARE_CC ProSiteProfiles 150 210
IPR010908 Longin_dom CDD 28 142
IPR011012 Longin-like_dom_sf SUPERFAMILY 28 150
IPR010908 Longin_dom ProSiteProfiles 7 126
IPR010908 Longin_dom SMART 56 138
IPR010908 Longin_dom Pfam 57 122
IPR042855 V_SNARE_CC Pfam 148 205
IPR001388 Synaptobrevin-like PRINTS 155 174
IPR001388 Synaptobrevin-like PRINTS 175 194
IPR001388 Synaptobrevin-like ProSitePatterns 168 187

No CAZYmes available for this sequence

No external refs found!