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  5. Sevir.5G399000.1

Sevir.5G399000.1


Description : tubby like protein 10


Gene families : OG_01_0000223 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000223_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G399000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G399000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_60


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR025659 Tubby-like_C Gene3D 356 480
IPR025659 Tubby-like_C Gene3D 116 311
IPR025659 Tubby-like_C SUPERFAMILY 108 480
IPR036047 F-box-like_dom_sf SUPERFAMILY 45 103
IPR000007 Tubby_C Pfam 120 475
IPR000007 Tubby_C PRINTS 401 417
IPR000007 Tubby_C PRINTS 177 193
IPR000007 Tubby_C PRINTS 437 456
IPR000007 Tubby_C PRINTS 383 400
IPR000007 Tubby_C PRINTS 458 480
IPR001810 F-box_dom Pfam 59 107
IPR018066 Tubby_C_CS ProSitePatterns 401 414
IPR018066 Tubby_C_CS ProSitePatterns 465 480

No CAZYmes available for this sequence

No external refs found!