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  5. Sevir.5G409000.1

Sevir.5G409000.1


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0011709 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011709_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G409000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G409000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001810 F-box_dom Pfam 41 76
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 156 181
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 261 286
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 209 234
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 309 334
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 130 155
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 103 129
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 182 208
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 235 260
IPR001611 Leu-rich_rpt Pfam 261 284
IPR001611 Leu-rich_rpt Pfam 156 175
IPR001611 Leu-rich_rpt Pfam 235 258
IPR001611 Leu-rich_rpt Pfam 212 232
IPR036047 F-box-like_dom_sf SUPERFAMILY 31 75
IPR032675 LRR_dom_sf Gene3D 50 292

No CAZYmes available for this sequence

No external refs found!