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  5. Sevir.1G195800.1

Sevir.1G195800.1


Description : thylakoidal ascorbate peroxidase


Gene families : OG_01_0000305 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000305_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G195800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G195800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_52


Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity ISM GOs from InterProScan
BP GO:0006979 response to oxidative stress ISM GOs from InterProScan
MF GO:0020037 heme binding ISM GOs from InterProScan
BP GO:0034599 cellular response to oxidative stress ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002016 Haem_peroxidase PRINTS 162 179
IPR002016 Haem_peroxidase PRINTS 180 192
IPR002016 Haem_peroxidase PRINTS 230 245
IPR002016 Haem_peroxidase PRINTS 270 285
IPR002016 Haem_peroxidase PRINTS 100 114
IPR010255 Haem_peroxidase_sf SUPERFAMILY 75 347
IPR044831 Ccp1-like PANTHER 1 483
IPR019793 Peroxidases_heam-ligand_BS ProSitePatterns 230 240
IPR002207 Peroxidase_I PRINTS 180 192
IPR002207 Peroxidase_I PRINTS 79 99
IPR002207 Peroxidase_I PRINTS 100 115
IPR002207 Peroxidase_I PRINTS 161 179
IPR002016 Haem_peroxidase ProSiteProfiles 126 353
IPR002016 Haem_peroxidase Pfam 87 326
HMM Family HMM Length Query Length e-Value Query Start Query End
AA2 255 484 9e-56 92 346
No external refs found!