Sevir.1G197600.1

Description : plant glycogenin-like starch initiation protein 1

Gene families : OG_01_0018075 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018075_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G197600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G197600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002495	Glyco_trans_8	Pfam	324	429
IPR029044	Nucleotide-diphossugar_trans	SUPERFAMILY	316	564
IPR029044	Nucleotide-diphossugar_trans	Gene3D	315	563

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GT8	257	643	8.8e-30	318	528

External Links

No external refs found!