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  5. Sevir.1G199000.1

Sevir.1G199000.1


Description : ATP-dependent Clp protease


Gene families : OG_01_0000248 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000248_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G199000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G199000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019489 Clp_ATPase_C SMART 506 599
IPR027417 P-loop_NTPase SUPERFAMILY 230 592
IPR004487 Clp_protease_ATP-bd_su_ClpX TIGRFAM 229 598
IPR003959 ATPase_AAA_core Pfam 295 499
IPR019489 Clp_ATPase_C Pfam 506 577
IPR027417 P-loop_NTPase Gene3D 225 504
IPR003593 AAA+_ATPase SMART 295 457

No CAZYmes available for this sequence

No external refs found!