Sevir.5G461000.1

Description : germin-like protein 10

Gene families : OG_01_0000853 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000853_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G461000.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G461000.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_175
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_17

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006045	Cupin_1	Pfam	67	209
IPR006045	Cupin_1	SMART	64	213
IPR019780	Germin_Mn-BS	ProSitePatterns	108	121
IPR014710	RmlC-like_jellyroll	Gene3D	24	221
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	25	220
IPR001929	Germin	PRINTS	143	163
IPR001929	Germin	PRINTS	176	191
IPR001929	Germin	PRINTS	113	133

No CAZYmes available for this sequence

External Links

No external refs found!