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  5. Sevir.5G461450.1

Sevir.5G461450.1


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG_01_0009232 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009232_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G461450.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G461450.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_163


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006952 defense response ISM GOs from InterProScan
MF GO:0043531 ADP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase SUPERFAMILY 216 490
IPR002182 NB-ARC Pfam 232 455
IPR041118 Rx_N Pfam 68 148
IPR032675 LRR_dom_sf Gene3D 593 903
IPR001611 Leu-rich_rpt Pfam 851 870
IPR042197 Apaf_helical Gene3D 394 475
IPR036388 WH-like_DNA-bd_sf Gene3D 476 572
IPR044974 Disease_R_plants PANTHER 860 1251
IPR044974 Disease_R_plants PANTHER 60 758
IPR044974 Disease_R_plants PANTHER 754 836
IPR027417 P-loop_NTPase Gene3D 215 379
IPR032675 LRR_dom_sf Gene3D 1126 1264
IPR032675 LRR_dom_sf Gene3D 916 1125

No CAZYmes available for this sequence

No external refs found!