Sevir.1G201300.1

Description : Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein

Gene families : OG_01_0004182 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004182_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G201300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G201300.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_13
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_411

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006568	PSP_pro-rich	SMART	314	368
IPR036875	Znf_CCHC_sf	SUPERFAMILY	247	280
IPR006568	PSP_pro-rich	Pfam	318	355
IPR001878	Znf_CCHC	ProSiteProfiles	260	276

No CAZYmes available for this sequence

External Links

No external refs found!