Sevir.1G202500.1

Description : chloride channel C

Gene families : OG_01_0001544 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001544_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G202500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G202500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_53

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	ISM	GOs from InterProScan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901702	salt transmembrane transporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001807	Cl-channel_volt-gated	Pfam	220	634
IPR000644	CBS_dom	ProSiteProfiles	669	731
IPR000644	CBS_dom	Pfam	667	725
IPR000644	CBS_dom	Pfam	783	831
IPR000644	CBS_dom	SMART	785	836
IPR000644	CBS_dom	SMART	673	726
IPR002251	Cl_channel_pln	PRINTS	380	387
IPR002251	Cl_channel_pln	PRINTS	362	372
IPR002251	Cl_channel_pln	PRINTS	504	520
IPR002251	Cl_channel_pln	PRINTS	348	356
IPR002251	Cl_channel_pln	PRINTS	137	145
IPR014743	Cl-channel_core	SUPERFAMILY	141	655
IPR000644	CBS_dom	ProSiteProfiles	781	842
IPR001807	Cl-channel_volt-gated	PRINTS	327	346
IPR001807	Cl-channel_volt-gated	PRINTS	640	654
IPR001807	Cl-channel_volt-gated	PRINTS	552	572
IPR001807	Cl-channel_volt-gated	PRINTS	602	621
IPR001807	Cl-channel_volt-gated	PRINTS	263	282
IPR001807	Cl-channel_volt-gated	PRINTS	232	249
IPR001807	Cl-channel_volt-gated	PRINTS	584	600

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.1G202500.1

Expression Profile

Co-expression Networks

Functional Annotation