Sevir.6G025500.1

Description : methyl-CPG-binding domain protein 13

Gene families : OG_01_0004810 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004810_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G025500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G025500.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	281	329
IPR001739	Methyl_CpG_DNA-bd	Pfam	284	327
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	274	350
IPR038945	MBD13-like	PANTHER	708	948
IPR038945	MBD13-like	PANTHER	1	134
IPR038945	MBD13-like	PANTHER	637	710
IPR038945	MBD13-like	PANTHER	142	539

No CAZYmes available for this sequence

External Links

No external refs found!