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  5. Seita.1G009600.1

Seita.1G009600.1


Description : Calcineurin-like metallo-phosphoesterase superfamily protein


Gene families : OG_01_0011711 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011711_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G009600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60


Type GO Term Name Evidence Source
CC GO:0030904 retromer complex ISM GOs from InterProScan
BP GO:0042147 retrograde transport, endosome to Golgi ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR028661 Vps29 CDD 3 180
IPR024654 Calcineurin-like_PHP_lpxH Pfam 4 157
IPR029052 Metallo-depent_PP-like Gene3D 1 182
IPR000979 Phosphodiesterase_MJ0936/Vps29 PANTHER 2 183
IPR000979 Phosphodiesterase_MJ0936/Vps29 NCBIfam 3 157
IPR029052 Metallo-depent_PP-like SUPERFAMILY 1 181
IPR000979 Phosphodiesterase_MJ0936/Vps29 PANTHER 1 187
IPR024654 Calcineurin-like_PHP_lpxH Pfam 4 157
IPR029052 Metallo-depent_PP-like SUPERFAMILY 1 181
IPR028661 Vps29 CDD 3 180
IPR000979 Phosphodiesterase_MJ0936/Vps29 TIGRFAM 3 157
IPR029052 Metallo-depent_PP-like Gene3D 1 182

No CAZYmes available for this sequence

No external refs found!