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  5. Seita.1G033600.1

Seita.1G033600.1


Description : beta galactosidase 1


Gene families : OG_01_0000304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000304_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G033600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008979 Galactose-bd-like_sf SUPERFAMILY 396 564
IPR001944 Glycoside_Hdrlase_35 PANTHER 22 716
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 38 336
IPR048913 BetaGal_gal-bd Pfam 608 694
IPR048913 BetaGal_gal-bd Pfam 462 529
IPR008979 Galactose-bd-like_sf SUPERFAMILY 574 710
IPR001944 Glycoside_Hdrlase_35 PRINTS 122 141
IPR001944 Glycoside_Hdrlase_35 PRINTS 46 63
IPR001944 Glycoside_Hdrlase_35 PRINTS 633 649
IPR001944 Glycoside_Hdrlase_35 PRINTS 244 259
IPR001944 Glycoside_Hdrlase_35 PRINTS 281 296
IPR001944 Glycoside_Hdrlase_35 PRINTS 301 317
IPR001944 Glycoside_Hdrlase_35 PRINTS 67 85
IPR001944 Glycoside_Hdrlase_35 PRINTS 606 620
IPR041392 GHD Pfam 356 412
IPR031330 Gly_Hdrlase_35_cat Pfam 42 333
IPR001944 Glycoside_Hdrlase_35 PRINTS 122 141
IPR001944 Glycoside_Hdrlase_35 PRINTS 46 63
IPR001944 Glycoside_Hdrlase_35 PRINTS 633 649
IPR001944 Glycoside_Hdrlase_35 PRINTS 244 259
IPR001944 Glycoside_Hdrlase_35 PRINTS 281 296
IPR001944 Glycoside_Hdrlase_35 PRINTS 301 317
IPR001944 Glycoside_Hdrlase_35 PRINTS 67 85
IPR001944 Glycoside_Hdrlase_35 PRINTS 606 620
IPR031330 Gly_Hdrlase_35_cat Pfam 42 333
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 38 336
IPR041392 GHD Pfam 341 412
IPR008979 Galactose-bd-like_sf SUPERFAMILY 574 710
IPR008979 Galactose-bd-like_sf SUPERFAMILY 396 564
IPR001944 Glycoside_Hdrlase_35 PANTHER 18 716
HMM Family HMM Length Query Length e-Value Query Start Query End
GH35 307 717 8.1e-110 43 332
No external refs found!