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  5. Seita.1G049200.1

Seita.1G049200.1


Description : heavy metal atpase 5


Gene families : OG_01_0014618 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014618_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G049200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISM GOs from InterProScan
MF GO:0005215 transporter activity ISM GOs from InterProScan
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036412 HAD-like_sf SUPERFAMILY 635 949
IPR036163 HMA_dom_sf SUPERFAMILY 32 100
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 381 630
IPR018303 ATPase_P-typ_P_site ProSitePatterns 638 644
IPR001757 P_typ_ATPase PRINTS 815 831
IPR001757 P_typ_ATPase PRINTS 874 899
IPR001757 P_typ_ATPase PRINTS 843 859
IPR027256 P-typ_ATPase_IB NCBIfam 349 952
IPR006121 HMA_dom ProSiteProfiles 183 249
IPR036163 HMA_dom_sf SUPERFAMILY 105 179
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 643 722
IPR006121 HMA_dom ProSiteProfiles 108 174
IPR006121 HMA_dom Pfam 38 98
IPR006121 HMA_dom Pfam 112 171
IPR044492 P_typ_ATPase_HD_dom SFLD 618 895
IPR001757 P_typ_ATPase NCBIfam 389 921
IPR036163 HMA_dom_sf SUPERFAMILY 178 247
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 723 774
IPR023214 HAD_sf Gene3D 603 900
IPR006121 HMA_dom CDD 112 173
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 436 522
IPR006121 HMA_dom CDD 37 99
IPR006122 HMA_Cu_ion-bd NCBIfam 35 99
IPR006122 HMA_Cu_ion-bd NCBIfam 112 172
IPR017969 Heavy-metal-associated_CS ProSitePatterns 114 143
IPR006121 HMA_dom ProSiteProfiles 34 100
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 381 630
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 643 722
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 723 774
IPR044492 P_typ_ATPase_HD_dom SFLD 618 895
IPR006122 HMA_Cu_ion-bd TIGRFAM 112 172
IPR006122 HMA_Cu_ion-bd TIGRFAM 35 99
IPR001757 P_typ_ATPase TIGRFAM 389 921
IPR027256 P-typ_ATPase_IB TIGRFAM 349 952
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 436 522
IPR006121 HMA_dom ProSiteProfiles 109 175
IPR036163 HMA_dom_sf SUPERFAMILY 32 100
IPR036412 HAD-like_sf SUPERFAMILY 635 949
IPR006121 HMA_dom ProSiteProfiles 35 101
IPR006121 HMA_dom CDD 37 99
IPR001757 P_typ_ATPase PRINTS 815 831
IPR001757 P_typ_ATPase PRINTS 874 899
IPR001757 P_typ_ATPase PRINTS 843 859
IPR017969 Heavy-metal-associated_CS ProSitePatterns 114 143
IPR036163 HMA_dom_sf SUPERFAMILY 178 247
IPR023214 HAD_sf Gene3D 603 900
IPR018303 ATPase_P-typ_P_site ProSitePatterns 638 644
IPR006121 HMA_dom Pfam 38 98
IPR006121 HMA_dom Pfam 112 171
IPR036163 HMA_dom_sf SUPERFAMILY 105 179
IPR006121 HMA_dom CDD 112 173

No CAZYmes available for this sequence

No external refs found!