Seita.1G049700.1

Description : A20/AN1-like zinc finger family protein

Gene families : OG_01_0007337 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007337_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G049700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002653	Znf_A20	SMART	14	38
IPR035896	AN1-like_Znf	SUPERFAMILY	95	166
IPR002653	Znf_A20	ProSiteProfiles	11	45
IPR000058	Znf_AN1	Pfam	112	148
IPR035896	AN1-like_Znf	Gene3D	89	167
IPR000058	Znf_AN1	SMART	112	149
IPR002653	Znf_A20	Pfam	15	38
IPR000058	Znf_AN1	ProSiteProfiles	106	152
IPR035896	AN1-like_Znf	SUPERFAMILY	95	166
IPR000058	Znf_AN1	Pfam	112	148
IPR002653	Znf_A20	SMART	14	38
IPR000058	Znf_AN1	ProSiteProfiles	109	152
IPR000058	Znf_AN1	SMART	112	149
IPR002653	Znf_A20	Pfam	15	38
IPR035896	AN1-like_Znf	Gene3D	89	167
IPR002653	Znf_A20	ProSiteProfiles	11	45

No CAZYmes available for this sequence

External Links

No external refs found!