1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G093800.1

Seita.1G093800.1


Description : Cleavage and polyadenylation specificity factor (CPSF) A subunit protein


Gene families : OG_01_0004751 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004751_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G093800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 1141
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 13 413
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 539 1076
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 452 779
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 877 1196
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 86 601
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 877 1196
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 13 413
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 452 779
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 86 601
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 539 1076
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 1141

No CAZYmes available for this sequence

No external refs found!