Seita.1G107900.1

Description : Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein

Gene families : OG_01_0001054 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001054_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G107900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001841	Znf_RING	ProSiteProfiles	284	325
IPR018957	Znf_C3HC4_RING-type	Pfam	284	324
IPR045859	RING-HC_PEX2	CDD	281	328
IPR013083	Znf_RING/FYVE/PHD	Gene3D	261	335
IPR017907	Znf_RING_CS	ProSitePatterns	300	309
IPR025654	PEX2/10	PANTHER	9	336
IPR006845	Pex_N	Pfam	57	269
IPR001841	Znf_RING	SMART	284	324
IPR013083	Znf_RING/FYVE/PHD	Gene3D	261	335
IPR017907	Znf_RING_CS	ProSitePatterns	300	309
IPR006845	Pex_N	Pfam	57	269
IPR001841	Znf_RING	SMART	284	324
IPR018957	Znf_C3HC4_RING-type	Pfam	284	324
IPR001841	Znf_RING	ProSiteProfiles	284	325

No CAZYmes available for this sequence

External Links

No external refs found!