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  5. Seita.1G117200.1

Seita.1G117200.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0016162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016162_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G117200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_136


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 66 427
IPR044616 RUP1/2 PANTHER 11 430
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 75 427
IPR001680 WD40_rpt Pfam 79 113
IPR001680 WD40_rpt Pfam 184 215
IPR001680 WD40_rpt SMART 175 215
IPR001680 WD40_rpt SMART 74 113
IPR001680 WD40_rpt SMART 313 354
IPR001680 WD40_rpt SMART 219 258
IPR001680 WD40_rpt SMART 381 426
IPR001680 WD40_rpt SMART 263 304
IPR001680 WD40_rpt SMART 133 172
IPR001680 WD40_rpt ProSiteProfiles 190 215
IPR001680 WD40_rpt ProSiteProfiles 270 313
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 66 427
IPR001680 WD40_rpt ProSiteProfiles 270 313
IPR001680 WD40_rpt ProSiteProfiles 190 215
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 75 427
IPR044616 RUP1/2 PANTHER 25 430
IPR001680 WD40_rpt Pfam 185 215
IPR001680 WD40_rpt SMART 74 113
IPR001680 WD40_rpt SMART 175 215
IPR001680 WD40_rpt SMART 313 354
IPR001680 WD40_rpt SMART 381 426
IPR001680 WD40_rpt SMART 219 258
IPR001680 WD40_rpt SMART 263 304
IPR001680 WD40_rpt SMART 133 172

No CAZYmes available for this sequence

No external refs found!